BLAST/PSIBLAST alignment of GI: 254780688 and GI: 116250473 at iteration 1
>gi|116250473|ref|YP_766311.1| flagellar motor switch protein [Rhizobium leguminosarum bv. viciae 3841] Length = 195
>gi|115255121|emb|CAK06195.1| putative flagellar motor switch protein [Rhizobium leguminosarum bv. viciae 3841] Length = 195
Score = 103 bits (256), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 43/80 (53%), Positives = 67/80 (83%)
Query: 68 NFDLIMNIPVKMQIILGSCCMQISNLVNLSKGDVITLDKRVGESVDITINNQKIAKGEIT 127
NFDLIM+IP+ +QI+LG+ MQ+S L+NL++G I LDK++GE V+I +N ++IA+GEIT
Sbjct: 114 NFDLIMDIPIDVQIMLGTSRMQVSGLMNLNEGATIALDKKIGEPVEIMVNGRRIARGEIT 173
Query: 128 IMEEDDTHFGVRVIEILNAQ 147
+++ DDT FGV++IE+L+ +
Sbjct: 174 VLDNDDTRFGVKLIEVLSTK 193