RPSBLAST alignment of GI: 254780688 and SCOP domain: d1o6aa_

Alignment

>d1o6aa_ b.139.1.1 (A:) Putative flagelar motor switch protein FliN {Thermotoga maritima [TaxId: 2336]} Length = 87

 Score = 75.0 bits (185), Expect = 3e-15
 Identities = 30/82 (36%), Positives = 55/82 (67%), Gaps = 3/82 (3%)

Query: 66  TDNFDLIMNIPVKMQIILGSCCMQISNLVNLSKGDVITLDKRVGESVDITINNQKIAKGE 125
           +D  +L+++IP+K+ + LG   M +  ++ +  G +I LDK  GE VDI +N + IA+GE
Sbjct: 1   SDKLELLLDIPLKVTVELGRTRMTLKRVLEMIHGSIIELDKLTGEPVDILVNGKLIARGE 60

Query: 126 ITIMEEDDTHFGVRVIEILNAQ 147
           + +++E   +FGVR+ EI++ +
Sbjct: 61  VVVIDE---NFGVRITEIVSPK 79

SCOP domain information

class: All beta proteins
fold: Surface presentation of antigens (SPOA)
superfamily: Surface presentation of antigens (SPOA)
family: Surface presentation of antigens (SPOA)
domain: Putative flagelar motor switch protein FliN
species: Thermotoga maritima [TaxId: 2336]