HHsearch alignment of GI: 254780689 and MMDB domain: 1lkv_X_1-65

>1lkv_X (X:1-65) Flagellar motor switch protein FLIG; chemotaxis, flagellar motion, structural protein; 2.80A {Thermotoga maritima}

Probab=92.90  E-value=0.11  Score=30.45  Aligned_cols=45  Identities=29%  Similarity=0.442  Sum_probs=28.9

Q ss_pred             CHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHC
Q ss_conf             567897419989999998403864788999957888999999837
Q gi|254780689|r  123 SIWDHLKETDPGVIADFLSKEHPQTTAYVLSMMPPSIGASVLLRF  167 (345)
Q Consensus       123 ~~~~~L~~~~~~~La~~L~~EhPQtiAlILs~L~~~~Aa~VL~~L  167 (345)
                      ....+|..=.|+.+|-+|..=.|...|-||++|+++..++|+.++
T Consensus        15 ~l~~~l~~EhPQ~iAliLs~L~p~~AA~VL~~lp~~~r~dv~~Ri   59 (65)
T 1lkv_X           15 QLVNFLQSEHPQTIAVVLSYLDPPVAAQILGALPEELQTEVLKRI   59 (65)
T ss_dssp             HHHHHHHTSCHHHHHHHHTTSCHHHHHHHHHHSCHHHHHHHHHHH
T ss_pred             HHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHH
T ss_conf             999999828999999999719989999999979999999999985