HHsearch results for GI: 254780689 and protein with PDBid: 1qc7_A
>1qc7_A Protein (FLIG); flagellar motor switch protein, structural protein; 2.20A {Thermotoga maritima} SCOP: a.118.14.1
Probab=99.93 E-value=7.4e-26 Score=189.21 Aligned_cols=95 Identities=20% Similarity=0.391 Sum_probs=92.5
Q ss_pred CCCHHHHHCCCHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
Q ss_conf 15789985099789999983098889999853889899999996100899999999985005899989999999999999
Q gi|254780689|r 249 VFLFDDLITLSSHDLSIVFNNISLEVLGKALHGTSIETQNAILHCLSNRQRKIIEENIVLNDSSIAPREVAMARRSIVQE 328 (345)
Q Consensus 249 mF~FeDl~~l~~~~l~~ll~evd~~~l~~ALkga~~e~~e~il~nmS~Ra~~~l~eel~~~~g~v~~~dve~Aq~~I~~~ 328 (345)
|||||||.++++++++.+|++|+.++|++||||++++++++||+|||+|+++++++||+.+ |||+.+||++||+.|++.
T Consensus 1 mFtFedl~~l~~~~l~~ll~~i~~~~l~~ALkga~~~~~~~il~nmS~R~~~~l~ee~~~~-g~v~~~dve~Aq~~Iv~~ 79 (101)
T 1qc7_A 1 MFVFEDILKLDDRSIQLVLREVDTRDLALALKGASDELKEKIFKNMSKRAAALLKDELEYM-GPVRLKDVEEAQQKIINI 79 (101)
T ss_dssp CCCGGGGGGBCHHHHHHHHTSSCHHHHHHHHTTSCHHHHHHHHTTSCHHHHHHHHHHHHHH-CSCCHHHHHHHHHHHHHH
T ss_pred CCCHHHHHCCCHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHC-CCCCHHHHHHHHHHHHHH
T ss_conf 9564566548988999999968998999998689999999999866899999999999863-998899999999999999
Q ss_pred HHHHHHCCCEECCCCC
Q ss_conf 9999986979518888
Q gi|254780689|r 329 AISLLKTNKIELSNPI 344 (345)
Q Consensus 329 ~r~L~~~G~I~l~~~~ 344 (345)
+|+|+++|+|+|..+.
T Consensus 80 ~r~L~~~G~I~L~~~~ 95 (101)
T 1qc7_A 80 IRRLEEAGEIVIARGG 95 (101)
T ss_dssp HHHHHHTTCCCBCTTC
T ss_pred HHHHHHCCCEEECCCC
T ss_conf 9999988998853799