HHsearch alignment of GI: 254780690 and MMDB domain: 3bzy_B_

>3bzy_B (B:) ESCU; auto cleavage protein, flagella, intein, T3SS, membrane, membrane protein, protein transport; 1.20A {Escherichia coli}
Probab=99.93  E-value=1.8e-25  Score=221.61  Aligned_cols=82  Identities=34%  Similarity=0.463  Sum_probs=80.9

Q ss_pred             CCCEEEEEEECCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCEEECHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf             55307888976888888889980765899999999997399788688999999972889894898999999999999973
Q gi|254780690|r  272 PTHYALALRYIQTENDAPVLVAKGQNLIAKKMRKIAYEHNIPIFEEPSLARSLFKQVPINSAIPPVFYKAVAQLIYKIYH  351 (354)
Q Consensus       272 PTH~AVAL~Y~~~~~~aP~vvaKG~~~~A~~Ir~~A~~~~Vpive~~~LAR~Ly~~~~ig~~Ip~~~y~aVA~il~~v~~  351 (354)
                      ||||||||+||+++++||+|+|||.|.+|++||++|+++||||++|++|||+||+++++|++||+|+|++||+||+|+|+
T Consensus         1 PTH~AVaL~Yd~~~~~aP~VvAkG~~~~A~~I~~~A~~~gIPiv~d~~LAr~L~~~~~~g~~IP~ely~~VAeil~~i~~   80 (83)
T 3bzy_B            1 PTHIAICLYYKLGETPLPLVIETGKDAKALQIIKLAELYDIPVIEDIPLARSLDKNIHKGQYITEDFFEPVAQLIRIAID   80 (83)
T ss_dssp             CCCEEEEEECCTTTCSSCEEEEEEETHHHHHHHHHHHHTTCCEEECHHHHHHHHHHCCTTCBCCGGGHHHHHHHHHHHCC
T ss_pred             CCEEEEEEEECCCCCCCCEEEEEECCHHHHHHHHHHHHCCCCEEECHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHH
T ss_conf             97799999876899989999997477889999999998698199799999999965889894699999999999999996


Q ss_pred             HC
Q ss_conf             02
Q gi|254780690|r  352 KK  353 (354)
Q Consensus       352 lk  353 (354)
                      +.
T Consensus        81 le   82 (83)
T 3bzy_B           81 LD   82 (83)
T ss_dssp             CC
T ss_pred             HC
T ss_conf             23