HHsearch alignment of GI: 254780690 and MMDB domain: 3c01_E_1-62
>3c01_E (E:1-62) Surface presentation of antigens protein SPAS; auto cleavage protein, flagella, ESCU, YSCU, intein, T3SS, membrane, inner membrane; 2.60A {Salmonella typhimurium}
Probab=99.76 E-value=1.4e-18 Score=167.00 Aligned_cols=62 Identities=26% Similarity=0.335 Sum_probs=61.1
Q ss_pred CCCEEEEEEECCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCEEECHHHHHHHHHHCCCCCC
Q ss_conf 55307888976888888889980765899999999997399788688999999972889894
Q gi|254780690|r 272 PTHYALALRYIQTENDAPVLVAKGQNLIAKKMRKIAYEHNIPIFEEPSLARSLFKQVPINSA 333 (354)
Q Consensus 272 PTH~AVAL~Y~~~~~~aP~vvaKG~~~~A~~Ir~~A~~~~Vpive~~~LAR~Ly~~~~ig~~ 333 (354)
||||||||+||+++++||+|+|||.|.+|++||++|++|||||+||++|||+||+++++||+
T Consensus 1 PTh~AVaL~Yd~~~~~aP~V~AkG~g~~A~~I~~~A~~~gIPi~~~~~LAr~L~~~~~~g~~ 62 (62)
T 3c01_E 1 PTHITIGIYFKPELMPIPMISVYETNQRALAVRAYAEKVGVPVIVDIKLARSLFKTHRRYDL 62 (62)
T ss_dssp CCCEEEEEECCTTTCSSCEEEEEEEHHHHHHHHHHHHHHTCCEEECHHHHHHHHHHCCTTCB
T ss_pred CCEEEEEEEECCCCCCCCEEEEEECCHHHHHHHHHHHHCCCCEEECHHHHHHHHHCCCCCCC
T ss_conf 96699998867899989999987477889999999998699499699999999972888770