HHSEARCH alignment of GI: 254780690 and SCOP domain: g2vt1.1

Alignment

Probab=99.97  E-value=4.9e-33  Score=278.42  Aligned_cols=102  Identities=24%  Similarity=0.283  Sum_probs=99.4

Q ss_pred             HHHHHHHHHHHCCCCCEEEECCCCEEEEEEECCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCEEECHHHHHHHHHHCCC
Q ss_conf             99999889860776869987355307888976888888889980765899999999997399788688999999972889
Q gi|254780690|r  251 RSRIRHKMMEATSRATIIITNPTHYALALRYIQTENDAPVLVAKGQNLIAKKMRKIAYEHNIPIFEEPSLARSLFKQVPI  330 (354)
Q Consensus       251 re~~~~~~~~~V~~A~vvitNPTH~AVAL~Y~~~~~~aP~vvaKG~~~~A~~Ir~~A~~~~Vpive~~~LAR~Ly~~~~i  330 (354)
                      +|+++++++++|++|||||||||||||||+||+++++||+|+|||.|.+|.+||++|++|||||+||++|||+||+++++
T Consensus         1 ~ei~~~~~~~~v~~a~vvv~NPTh~AVAL~Yd~~~~~aP~VvAkG~g~~A~~I~~~A~e~gIPi~ed~~LAr~L~~~~~i   80 (102)
T g2vt1.1           1 IEILSEQTKSDIRNSKLVVMNPTHIAIGIYFNPEIAPAPFISLIETNQCALAVRKYANEVGIPTVRDVKLARKLYKTHTK   80 (102)
T ss_dssp             CCCSCHHHHHHHHTCSEEEECCCSEEEEEECCTTTCSSCEEEEEEEHHHHHHHHHHHHHTTCCEEECHHHHHHHHHHCCS
T ss_pred             CCCHHHHHHHCCCCCCEEEECCCEEEEEEEECCCCCCCCEEEEEECCHHHHHHHHHHHHCCCCEEECHHHHHHHHHCCCC
T ss_conf             92012558740877888997897479999976888989889998577899999999998499699899999999974888


Q ss_pred             CCCCCHHHHHHHHHHHHHHHHH
Q ss_conf             8948989999999999999730
Q gi|254780690|r  331 NSAIPPVFYKAVAQLIYKIYHK  352 (354)
Q Consensus       331 g~~Ip~~~y~aVA~il~~v~~l  352 (354)
                      |++||+|+|++||+||+|||++
T Consensus        81 g~~IP~ely~aVAeIL~~v~~l  102 (102)
T g2vt1.1          81 YSFVDFEHLDEVLRLIVWLEQV  102 (102)
T ss_dssp             SEECCTTTHHHHHHHHHHHHHC
T ss_pred             CCCCCHHHHHHHHHHHHHHHHC
T ss_conf             9958999999999999999759

SCOP domain information

class:
fold:
superfamily:
family:
domain:
species: