HHSEARCH alignment of GI: 254780690 and SCOP domain: g3c01.1

Alignment

Probab=100.00  E-value=1.9e-33  Score=281.66  Aligned_cols=102  Identities=20%  Similarity=0.265  Sum_probs=99.2

Q ss_pred             HHHHHHHHHHCCCCCEEEECCCCEEEEEEECCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCEEECHHHHHHHHHHCCCC
Q ss_conf             99998898607768699873553078889768888888899807658999999999973997886889999999728898
Q gi|254780690|r  252 SRIRHKMMEATSRATIIITNPTHYALALRYIQTENDAPVLVAKGQNLIAKKMRKIAYEHNIPIFEEPSLARSLFKQVPIN  331 (354)
Q Consensus       252 e~~~~~~~~~V~~A~vvitNPTH~AVAL~Y~~~~~~aP~vvaKG~~~~A~~Ir~~A~~~~Vpive~~~LAR~Ly~~~~ig  331 (354)
                      |+++++|+++|++|||||||||||||||+||+++++||+|+|||.|.+|.+||++|++|||||+|||+|||+||+++++|
T Consensus         1 Ei~~~~~~~~v~~a~vvi~NPTh~AVAL~Yd~~~~~aP~VvAkG~g~~A~~I~~~A~~~gIPi~e~~~LAr~L~~~~~ig   80 (108)
T g3c01.1           1 EILSEQVKSDIENSRLIVANPTHITIGIYFKPELMPIPMISVYETNQRALAVRAYAEKVGVPVIVDIKLARSLFKTHRRY   80 (108)
T ss_dssp             CCSCHHHHHHHHTCSEEEECCCCEEEEEECCTTTCSSCEEEEEEEHHHHHHHHHHHHHHTCCEEECHHHHHHHHHHCCTT
T ss_pred             CCCCHHHHHCCCCCCEEEECCCEEEEEEEECCCCCCCCEEEEEECCHHHHHHHHHHHHCCCCEEECHHHHHHHHHCCCCC
T ss_conf             91105568418878889978871699999778889898899985758999999999985995897899999999728789


Q ss_pred             CCCCHHHHHHHHHHHHHHHHHC
Q ss_conf             9489899999999999997302
Q gi|254780690|r  332 SAIPPVFYKAVAQLIYKIYHKK  353 (354)
Q Consensus       332 ~~Ip~~~y~aVA~il~~v~~lk  353 (354)
                      ++||+++|++||+||+|||+++
T Consensus        81 ~~IP~ely~aVA~IL~~v~~l~  102 (108)
T g3c01.1          81 DLVSLEEIDEVLRLLVWLEEVE  102 (108)
T ss_dssp             CBCCHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHHHHHHHHH
T ss_conf             8389999999999999999988

SCOP domain information

class:
fold:
superfamily:
family:
domain:
species: