PSIBLAST alignment of GI: 254780690 and protein with PDB id: 2jli
>gi|222446918|pdb|2JLI|A Chain A, Atomic Resolution Structure Of The Cytoplasmic Domain Of Yersinia Pestis Yscu, A Regulatory Switch Involved In Type Iii Secretion Length = 123
Score = 138 bits (348), Expect = 1e-30, Method: Composition-based stats.
Identities = 36/122 (29%), Positives = 67/122 (54%)
Query: 228 EIKDEIKQSYGNPIIKNRQKSIARSRIRHKMMEATSRATIIITNPTHYALALRYIQTEND 287
EIK E K+ G+P IK++++ + M E R+++++ NPTH A+ + Y + E
Sbjct: 1 EIKREYKEMEGSPEIKSKRRQFHQEIQSRNMRENVKRSSVVVANPTHIAIGILYKRGETP 60
Query: 288 APVLVAKGQNLIAKKMRKIAYEHNIPIFEEPSLARSLFKQVPINSAIPPVFYKAVAQLIY 347
P++ K + + +RKIA E +PI + LAR+L+ ++ IP +A A+++
Sbjct: 61 LPLVTFKYTDAQVQTVRKIAEEEGVPILQRIPLARALYWDALVDHYIPAEQIEATAEVLR 120
Query: 348 KI 349
+
Sbjct: 121 WL 122