RPSBLAST alignment for GI: 254780690 and conserved domain: PRK08156
>gnl|CDD|181258 PRK08156, PRK08156, type III secretion system protein SpaS; Validated. Length = 361
Score = 95.5 bits (238), Expect = 2e-20
Identities = 84/328 (25%), Positives = 148/328 (45%), Gaps = 28/328 (8%)
Query: 9 NKTEAPSSKKIEDALNEGNAPISREASLFSSILACLIYLLFFFSPGIYSVTSDLHVLLAS 68
NKTE P+ KK+ D+ +G + S++ +L + YL+ F S S +LA
Sbjct: 3 NKTEKPTKKKLRDSAKKGQSFKSKDLITAVVLLGGIAYLVSFGS--FSEFMSIYKRILAD 60
Query: 69 ATQRKLEDIS---HIVFLLTHLSLSASRLVIPGLLLFMMFGIGSYLIQRIPVLNLNHVKP 125
+ D I+FL +++IP LLL ++ G L+Q VL +K
Sbjct: 61 NFDINIGDYFLAVMIIFL---------KILIPFLLLCLLAGALPTLLQTRFVLATEAIKL 111
Query: 126 SFKRVSLREGIKRIYSINNLVNFMKSFVKIILVGTIITISLTENYFTMLDFI------SA 179
+F ++ +G+K+I+S+ + K FVK +L +I +LT F +
Sbjct: 112 NFSALNPVKGLKKIFSLRTV----KEFVKALLY--LIVFALTAYVFWKNYKKEIFSQLNG 165
Query: 180 NPHSILYHAFFTVRKVLIMI-LLFIATLTVLDIGWSYHQWYSKLKMSKQEIKDEIKQSYG 238
N L + + L++ L + +LD Y +KM KQE+K E K+ G
Sbjct: 166 NIVG-LIVIWRELLVKLVLTFLACALIVLILDFIAEYFLHMKDMKMDKQEVKREYKEQEG 224
Query: 239 NPIIKNRQKSIARSRIRHKMMEATSRATIIITNPTHYALALRYIQTENDAPVLVAKGQNL 298
NP IK++++ + + ++ + +I+ NPTH A+ + + P + + N
Sbjct: 225 NPEIKSKRREAHQEILSEQVKSDIRNSRLIVANPTHIAIGIYFNPELAPIPFISVRETNQ 284
Query: 299 IAKKMRKIAYEHNIPIFEEPSLARSLFK 326
A +R A + +P+ + LAR L+K
Sbjct: 285 RALAVRAYAEKVGVPVVRDIKLARRLYK 312