RPSBLAST alignment for GI: 254780690 and conserved domain: PRK12772
>gnl|CDD|183736 PRK12772, PRK12772, bifunctional flagellar biosynthesis protein FliR/FlhB; Provisional. Length = 609
Score = 191 bits (486), Expect = 3e-49
Identities = 108/350 (30%), Positives = 190/350 (54%), Gaps = 4/350 (1%)
Query: 6 APDNKTEAPSSKKIEDALNEGNAPISREASLFSSILACLIYLLFFFSPGIYSVTSDLHVL 65
A D+KTE + KK DA +G S+E +L ++LAC + L ++ +
Sbjct: 261 ASDDKTEEATPKKKSDARKKGQIAKSKELALAITLLACTLVLSALGGYVANTLKETMIYF 320
Query: 66 LASATQRKLEDISHIVFLLTHLSLSASRLVIPGLLLFMMFGIGSYLIQRIPVLNLNHVKP 125
L + L S + L L +++ +P L M+FG+ + L+Q + +KP
Sbjct: 321 LNNYLNMNLNYNSLNSLAIITL-LRVAKIFLPVALPIMVFGVAANLLQTGFLFTKEPLKP 379
Query: 126 SFKRVSLREGIKRIYSINNLVNFMKSFVKIILVGTIITISLTENYFTMLDFISANPHSIL 185
K+++ G KR++S+ +++ +K I +VG + L +NY +L+ + I+
Sbjct: 380 DLKKLNPINGFKRMFSMRSVMELLKDLTIITIVGIVGYKFLQDNYLDILNLGNLYLPYII 439
Query: 186 YHAFFTVRKVLIMILLFIATLTVLDIGWSYHQWYSKLKMSKQEIKDEIKQSYGNPIIKNR 245
V + I L + + V D + +Q+ L+M+KQE+K+E KQ G+P IK +
Sbjct: 440 TELKSLVISIFFRITLIMIIIAVADYVYQKYQYNKDLRMTKQEVKEEYKQDEGDPQIKAK 499
Query: 246 QKSIARSRIRHKMMEATSRATIIITNPTHYALALRYIQTENDAPVLVAKGQNLIAKKMRK 305
K R +MM+ +AT+++TNPTH A+AL+Y + +++AP +VAKG + +A K+++
Sbjct: 500 IKQKQREMAMQRMMQEVPKATVVVTNPTHIAVALKYEEGKDEAPKVVAKGADYVALKIKE 559
Query: 306 IAYEHNIPIFEEPSLARSLFKQVPINSAIPPVFYKAVAQ---LIYKIYHK 352
IA E+++PI E LAR ++K+V I+ IP Y+AVA+ ++YK+ K
Sbjct: 560 IAKENDVPIIENKPLARLIYKKVEIDQEIPQDMYQAVAEILAIVYKLKKK 609