RPSBLAST alignment of GI: 254780690 and protein with PDBid: 2jli

>2jli_A YSCU, YOP proteins translocation protein; cell membrane, transmembrane, protein transport, type III secretion system, plasmid, membrane; 1.13A {Yersinia pestis} Length = 123

 Score =  155 bits (394), Expect = 1e-38
 Identities = 36/119 (30%), Positives = 66/119 (55%)

Query: 228 EIKDEIKQSYGNPIIKNRQKSIARSRIRHKMMEATSRATIIITNPTHYALALRYIQTEND 287
           EIK E K+  G+P IK++++   +      M E   R+++++ NPTH A+ + Y + E  
Sbjct: 1   EIKREYKEMEGSPEIKSKRRQFHQEIQSRNMRENVKRSSVVVANPTHIAIGILYKRGETP 60

Query: 288 APVLVAKGQNLIAKKMRKIAYEHNIPIFEEPSLARSLFKQVPINSAIPPVFYKAVAQLI 346
            P++  K  +   + +RKIA E  +PI +   LAR+L+    ++  IP    +A A+++
Sbjct: 61  LPLVTFKYTDAQVQTVRKIAEEEGVPILQRIPLARALYWDALVDHYIPAEQIEATAEVL 119