RPS-BLAST 2.2.22 [Sep-27-2009] Database: CddA 21,609 sequences; 6,263,737 total letters Searching..................................................done Query= gi|254780691|ref|YP_003065104.1| hypothetical protein CLIBASIA_02890 [Candidatus Liberibacter asiaticus str. psy62] (55 letters) >gnl|CDD|177222 MTH00167, COX1, cytochrome c oxidase subunit I; Provisional. Length = 512 Score = 25.0 bits (55), Expect = 4.9 Identities = 11/30 (36%), Positives = 16/30 (53%) Query: 12 HVRGVHDILLRSSFFLKLQNMKNIGLQRYY 41 H+ GV IL +F + NMK G+ +Y Sbjct: 151 HLAGVSSILGSINFITTIINMKPPGITQYQ 180 Database: CddA Posted date: Feb 4, 2011 9:38 PM Number of letters in database: 6,263,737 Number of sequences in database: 21,609 Lambda K H 0.325 0.137 0.377 Gapped Lambda K H 0.267 0.0709 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 21609 Number of Hits to DB: 632,037 Number of extensions: 22327 Number of successful extensions: 61 Number of sequences better than 10.0: 1 Number of HSP's gapped: 61 Number of HSP's successfully gapped: 5 Length of query: 55 Length of database: 6,263,737 Length adjustment: 28 Effective length of query: 27 Effective length of database: 5,658,685 Effective search space: 152784495 Effective search space used: 152784495 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (21.6 bits) S2: 50 (23.1 bits)