HHsearch alignment for GI: 254780693 and conserved domain: COG3398
>COG3398 Uncharacterized protein conserved in archaea [Function unknown].
Probab=92.36 E-value=0.27 Score=28.38 Aligned_cols=35 Identities=29% Similarity=0.165 Sum_probs=28.5
Q ss_pred HHHHHHHHCC--CCHHHHHHHHCCCHHHHHHHHHHHH
Q ss_conf 9999999879--9978999994999889999999999
Q gi|254780693|r 179 TSCLQLAGDG--YTSEEIAEKLGLSVHTVNAYLGSAT 213 (235)
Q Consensus 179 ~evL~l~a~G--~t~~eIA~~L~iS~~TV~~hl~~i~ 213 (235)
T Consensus 177 k~I~~eiq~~~~~t~~~ia~~l~ls~aTV~~~lk~l~ 213 (240)
T COG3398 177 KAIIYEIQENKCNTNLLIAYELNLSVATVAYHLKKLE 213 (240)
T ss_pred HHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHHH
T ss_conf 8999998628741599998870865999999999898