HHsearch alignment for GI: 254780693 and conserved domain: COG3398

>COG3398 Uncharacterized protein conserved in archaea [Function unknown].
Probab=92.36  E-value=0.27  Score=28.38  Aligned_cols=35  Identities=29%  Similarity=0.165  Sum_probs=28.5

Q ss_pred             HHHHHHHHCC--CCHHHHHHHHCCCHHHHHHHHHHHH
Q ss_conf             9999999879--9978999994999889999999999
Q gi|254780693|r  179 TSCLQLAGDG--YTSEEIAEKLGLSVHTVNAYLGSAT  213 (235)
Q Consensus       179 ~evL~l~a~G--~t~~eIA~~L~iS~~TV~~hl~~i~  213 (235)
T Consensus       177 k~I~~eiq~~~~~t~~~ia~~l~ls~aTV~~~lk~l~  213 (240)
T COG3398         177 KAIIYEIQENKCNTNLLIAYELNLSVATVAYHLKKLE  213 (240)
T ss_pred             HHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHHH
T ss_conf             8999998628741599998870865999999999898