HHsearch alignment for GI: 254780693 and conserved domain: COG4566

>COG4566 TtrR Response regulator [Signal transduction mechanisms].
Probab=99.38  E-value=2.4e-12  Score=107.14  Aligned_cols=63  Identities=29%  Similarity=0.351  Sum_probs=60.0

Q ss_pred             CCCCCHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCC
Q ss_conf             444998999999999879997899999499988999999999998079978999999997699
Q gi|254780693|r  171 ARNLTERETSCLQLAGDGYTSEEIAEKLGLSVHTVNAYLGSATVKLDAVNRIQAIAKAIRFGY  233 (235)
Q Consensus       171 ~~~LT~RE~evL~l~a~G~t~~eIA~~L~iS~~TV~~hl~~i~~KLg~~nR~qava~A~~~Gl  233 (235)
T Consensus       140 l~tLT~RERqVl~~vV~G~~NKqIA~dLgiS~rTVe~HRanvM~Km~a~SlaeLvr~a~~~~~  202 (202)
T COG4566         140 LATLTPRERQVLDLVVRGLMNKQIAFDLGISERTVELHRANVMEKMQARSLAELVRMALSLGL  202 (202)
T ss_pred             HHHCCHHHHHHHHHHHCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCC
T ss_conf             986698899999999837630899998398664599999999999733319999999985459