HHsearch alignment for GI: 254780693 and conserved domain: COG5625

>COG5625 Predicted transcription regulator containing HTH domain [Transcription].

Probab=93.12  E-value=0.094  Score=31.65  Aligned_cols=43  Identities=28%  Similarity=0.320  Sum_probs=36.0

Q ss_pred             CCCHHHHHHHHHHH---CCCCHHHHHHHHCCCHHHHHHHHHHHHHH
Q ss_conf             49989999999998---79997899999499988999999999998
Q gi|254780693|r  173 NLTERETSCLQLAG---DGYTSEEIAEKLGLSVHTVNAYLGSATVK  215 (235)
Q Consensus       173 ~LT~RE~evL~l~a---~G~t~~eIA~~L~iS~~TV~~hl~~i~~K  215 (235)
T Consensus        18 glk~~eI~IY~lLve~~~~mri~ei~rEl~is~rtvr~~v~~l~rr   63 (113)
T COG5625          18 GLKKNEIRIYSLLVEKGRGMRIREIQRELGISERTVRAAVAVLLRR   63 (113)
T ss_pred             CCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             7783300155689884677417899999829999999999999985