HHsearch alignment for GI: 254780693 and conserved domain: PRK06759

>PRK06759 RNA polymerase factor sigma-70; Validated.
Probab=97.68  E-value=0.00013  Score=52.03  Aligned_cols=45  Identities=24%  Similarity=0.099  Sum_probs=42.9

Q ss_pred             CCCHHHHHHHHHH-HCCCCHHHHHHHHCCCHHHHHHHHHHHHHHCC
Q ss_conf             4998999999999-87999789999949998899999999999807
Q gi|254780693|r  173 NLTERETSCLQLA-GDGYTSEEIAEKLGLSVHTVNAYLGSATVKLD  217 (235)
Q Consensus       173 ~LT~RE~evL~l~-a~G~t~~eIA~~L~iS~~TV~~hl~~i~~KLg  217 (235)
T Consensus       106 ~L~~re~~ii~~~~~~g~t~~EIA~~~gis~~~Vk~~~r~Al~KLR  151 (154)
T PRK06759        106 VLDEKEKYIIFERFFVGKTMGEIALETEMTYYQVRWIYRQALEKMR  151 (154)
T ss_pred             HCCHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHH
T ss_conf             4999999999999996998999999989899999999999999987