HHsearch alignment for GI: 254780693 and conserved domain: PRK07122

>PRK07122 RNA polymerase sigma factor SigF; Reviewed.
Probab=96.96  E-value=0.0025  Score=42.92  Aligned_cols=45  Identities=33%  Similarity=0.464  Sum_probs=42.5

Q ss_pred             CCCHHHHHHHHHH-HCCCCHHHHHHHHCCCHHHHHHHHHHHHHHCC
Q ss_conf             4998999999999-87999789999949998899999999999807
Q gi|254780693|r  173 NLTERETSCLQLA-GDGYTSEEIAEKLGLSVHTVNAYLGSATVKLD  217 (235)
Q Consensus       173 ~LT~RE~evL~l~-a~G~t~~eIA~~L~iS~~TV~~hl~~i~~KLg  217 (235)
T Consensus       214 ~L~eREr~Vi~lry~e~~Tl~EIa~~lGiSreRVrQIe~~AL~KLR  259 (263)
T PRK07122        214 ALPERERTVLVLRFFESMTQTQIAERVGISQMHVSRLLAKSLARLR  259 (263)
T ss_pred             CCCHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHH
T ss_conf             5999999999999569998999999989799999999999999999