HHsearch alignment for GI: 254780693 and conserved domain: PRK07921

>PRK07921 RNA polymerase sigma factor SigB; Reviewed.

Probab=96.23  E-value=0.091  Score=31.78  Aligned_cols=51  Identities=27%  Similarity=0.290  Sum_probs=44.5

Q ss_pred             CCCHHHHHHHHHHH-----CCCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHH
Q ss_conf             49989999999998-----7999789999949998899999999999807997899
Q gi|254780693|r  173 NLTERETSCLQLAG-----DGYTSEEIAEKLGLSVHTVNAYLGSATVKLDAVNRIQ  223 (235)
Q Consensus       173 ~LT~RE~evL~l~a-----~G~t~~eIA~~L~iS~~TV~~hl~~i~~KLg~~nR~q  223 (235)
T Consensus       258 ~L~eREr~IL~~RfGl~~~~~~TL~EIg~~lgvSrERVRQIE~~AL~KLR~~~~~~  313 (320)
T PRK07921        258 TLDEREQQVIRLRFGLDDGQPRTLDQIGKLFGLSRERVRQIEREVMSKLRHGERAD  313 (320)
T ss_pred             CCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHH
T ss_conf             59999999999974899989747999998979699999999999999970728888