HHsearch alignment for GI: 254780693 and conserved domain: PRK08295

>PRK08295 RNA polymerase factor sigma-70; Validated.

Probab=98.08  E-value=4.6e-05  Score=55.28  Aligned_cols=45  Identities=33%  Similarity=0.420  Sum_probs=43.2

Q ss_pred             CCCHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHCC
Q ss_conf             499899999999987999789999949998899999999999807
Q gi|254780693|r  173 NLTERETSCLQLAGDGYTSEEIAEKLGLSVHTVNAYLGSATVKLD  217 (235)
Q Consensus       173 ~LT~RE~evL~l~a~G~t~~eIA~~L~iS~~TV~~hl~~i~~KLg  217 (235)
T Consensus       155 ~l~~~e~~V~~~~~eg~s~~EIA~~l~is~~tV~~~l~RarkkLr  199 (209)
T PRK08295        155 LLSDLEKEVLELYLDGKSYQEIAEELNRHVKSIDNALQRVKRKLE  199 (209)
T ss_pred             CCCHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHH
T ss_conf             691899999999986999999999989299999999999999999