HHsearch alignment for GI: 254780693 and conserved domain: PRK08301

>PRK08301 sporulation sigma factor SigE; Reviewed.

Probab=96.74  E-value=0.0041  Score=41.38  Aligned_cols=45  Identities=27%  Similarity=0.458  Sum_probs=41.8

Q ss_pred             CCCCHHHHHHHHHH-----HCCCCHHHHHHHHCCCHHHHHHHHHHHHHHC
Q ss_conf             44998999999999-----8799978999994999889999999999980
Q gi|254780693|r  172 RNLTERETSCLQLA-----GDGYTSEEIAEKLGLSVHTVNAYLGSATVKL  216 (235)
Q Consensus       172 ~~LT~RE~evL~l~-----a~G~t~~eIA~~L~iS~~TV~~hl~~i~~KL  216 (235)
T Consensus       182 ~~L~eREr~Ii~lRfGL~~~~~~Tl~EIa~~lgISrerVrQIe~~AL~KL  231 (239)
T PRK08301        182 KKLNDREKQIMELRFGLAGGEEKTQKEVADMLGISQSYISRLEKRIIKRL  231 (239)
T ss_pred             HCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHH
T ss_conf             64899999999999578899840699999998978999999999999999