HHsearch alignment for GI: 254780693 and conserved domain: PRK09047

>PRK09047 RNA polymerase factor sigma-70; Validated.
Probab=97.98  E-value=1.8e-05  Score=58.10  Aligned_cols=45  Identities=24%  Similarity=0.257  Sum_probs=42.3

Q ss_pred             CCCHHHHHHHHHH-HCCCCHHHHHHHHCCCHHHHHHHHHHHHHHCC
Q ss_conf             4998999999999-87999789999949998899999999999807
Q gi|254780693|r  173 NLTERETSCLQLA-GDGYTSEEIAEKLGLSVHTVNAYLGSATVKLD  217 (235)
Q Consensus       173 ~LT~RE~evL~l~-a~G~t~~eIA~~L~iS~~TV~~hl~~i~~KLg  217 (235)
T Consensus       106 ~Lp~~qR~vl~L~~~egls~~EIA~~l~is~~tVk~~l~RAr~~Lr  151 (161)
T PRK09047        106 KLPARQREAFLLRYWEDMDVAETAAAMGCSEGSVKTHCSRATHTLA  151 (161)
T ss_pred             HCCHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHH
T ss_conf             1999999998999998779999999989699999999999999999