HHsearch alignment for GI: 254780693 and conserved domain: PRK09390
>PRK09390 fixJ response regulator FixJ; Provisional.
Probab=99.71 E-value=3.4e-17 Score=141.74 Aligned_cols=63 Identities=27% Similarity=0.363 Sum_probs=61.6
Q ss_pred CCCCHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCC
Q ss_conf 449989999999998799978999994999889999999999980799789999999976999
Q gi|254780693|r 172 RNLTERETSCLQLAGDGYTSEEIAEKLGLSVHTVNAYLGSATVKLDAVNRIQAIAKAIRFGYI 234 (235)
Q Consensus 172 ~~LT~RE~evL~l~a~G~t~~eIA~~L~iS~~TV~~hl~~i~~KLg~~nR~qava~A~~~Gli 234 (235)
T Consensus 140 ~~LT~RE~eVL~ll~~G~snkeIA~~L~iS~~TV~~h~~~I~~KL~v~~~~elv~~A~~~Gll 202 (202)
T PRK09390 140 ASLSERERQVMDGLVAGLSNKVIARDLDISPRTVEVYRANVMTKMQAGSLSELVRMALRAGAL 202 (202)
T ss_pred CCCCHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCC
T ss_conf 669989999999998389689999997987889999999999996889889999999985999