HHsearch alignment for GI: 254780693 and conserved domain: PRK09635

>PRK09635 sigI RNA polymerase sigma factor SigI; Provisional.
Probab=96.66  E-value=0.024  Score=35.85  Aligned_cols=48  Identities=21%  Similarity=0.207  Sum_probs=43.0

Q ss_pred             CCCHHHHHHHHH-HHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCCC
Q ss_conf             499899999999-987999789999949998899999999999807997
Q gi|254780693|r  173 NLTERETSCLQL-AGDGYTSEEIAEKLGLSVHTVNAYLGSATVKLDAVN  220 (235)
Q Consensus       173 ~LT~RE~evL~l-~a~G~t~~eIA~~L~iS~~TV~~hl~~i~~KLg~~n  220 (235)
T Consensus       118 ~L~P~eRaa~vLrdvfg~~~~EIA~~Lg~s~~a~Rqll~RAR~~l~~~~  166 (290)
T PRK09635        118 RLGPAERVVFVLHEIFGLPYQQIATTIGSQASTCRQLAHRARRKINESR  166 (290)
T ss_pred             CCCHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHCCC
T ss_conf             2998685455269860898899999968998999999999999873238