HHsearch alignment for GI: 254780693 and conserved domain: PRK09639

>PRK09639 RNA polymerase sigma factor SigX; Provisional.
Probab=97.94  E-value=2.3e-05  Score=57.39  Aligned_cols=45  Identities=36%  Similarity=0.519  Sum_probs=42.4

Q ss_pred             CCCHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHCC
Q ss_conf             499899999999987999789999949998899999999999807
Q gi|254780693|r  173 NLTERETSCLQLAGDGYTSEEIAEKLGLSVHTVNAYLGSATVKLD  217 (235)
Q Consensus       173 ~LT~RE~evL~l~a~G~t~~eIA~~L~iS~~TV~~hl~~i~~KLg  217 (235)
T Consensus       112 ~Lp~~~r~v~~l~~~g~s~~EIA~~l~is~~tVk~~l~RA~~~Lr  156 (166)
T PRK09639        112 KMTERDRTVLLLRFSGYSYKEIAQALGIDESSVGTTLHRAKKKFR  156 (166)
T ss_pred             HCCHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHH
T ss_conf             399999999999993899999999989199999999999999999