HHsearch alignment for GI: 254780693 and conserved domain: PRK09836
>PRK09836 DNA-binding transcriptional activator CusR; Provisional.
Probab=93.69 E-value=0.15 Score=30.29 Aligned_cols=48 Identities=17% Similarity=0.123 Sum_probs=40.4
Q ss_pred CCCHHHHHHHHHHHCC----CCHHHHHHHHC-----CCHHHHHHHHHHHHHHCCCCC
Q ss_conf 4998999999999879----99789999949-----998899999999999807997
Q gi|254780693|r 173 NLTERETSCLQLAGDG----YTSEEIAEKLG-----LSVHTVNAYLGSATVKLDAVN 220 (235)
Q Consensus 173 ~LT~RE~evL~l~a~G----~t~~eIA~~L~-----iS~~TV~~hl~~i~~KLg~~n 220 (235)
T Consensus 150 ~LT~~E~~lL~~L~~~~g~vvsre~l~~~vw~~~~~~~~~~vdv~I~rLR~Kl~~~~ 206 (226)
T PRK09836 150 TLTSKEFTLLEFFLRHQGEVLPRSLIASQVWDMNFDSDTNAIDVAVKRLRGKIDNDF 206 (226)
T ss_pred ECCHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCC
T ss_conf 568899999999986899648799999996288878885889999999999857889