HHsearch alignment for GI: 254780693 and conserved domain: PRK10100
>PRK10100 DNA-binding transcriptional regulator CsgD; Provisional.
Probab=99.73 E-value=2.9e-17 Score=142.25 Aligned_cols=62 Identities=32% Similarity=0.242 Sum_probs=58.4
Q ss_pred CCCCCCHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHC
Q ss_conf 74449989999999998799978999994999889999999999980799789999999976
Q gi|254780693|r 170 AARNLTERETSCLQLAGDGYTSEEIAEKLGLSVHTVNAYLGSATVKLDAVNRIQAIAKAIRF 231 (235)
Q Consensus 170 ~~~~LT~RE~evL~l~a~G~t~~eIA~~L~iS~~TV~~hl~~i~~KLg~~nR~qava~A~~~ 231 (235)
T Consensus 152 ~~~~LT~RE~eIL~lla~G~sNkEIA~~L~iSe~TVk~H~~~I~~KL~v~~R~qav~~A~~n 213 (216)
T PRK10100 152 ESALLTHREKEILNKLRIGASNNEIARSLFISENTVKTHLYNLFKKIAVKNRTQAVSWANDN 213 (216)
T ss_pred CCCCCCHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
T ss_conf 77899989999999998799999999894988989999999999980999999999999986