HHsearch alignment for GI: 254780693 and conserved domain: PRK11517
>PRK11517 transcriptional regulatory protein YedW; Provisional.
Probab=93.69 E-value=0.15 Score=30.18 Aligned_cols=47 Identities=23% Similarity=0.226 Sum_probs=40.3
Q ss_pred CCCHHHHHHHHHHHCC----CCHHHHHHHHC-----CCHHHHHHHHHHHHHHCCCC
Q ss_conf 4998999999999879----99789999949-----99889999999999980799
Q gi|254780693|r 173 NLTERETSCLQLAGDG----YTSEEIAEKLG-----LSVHTVNAYLGSATVKLDAV 219 (235)
Q Consensus 173 ~LT~RE~evL~l~a~G----~t~~eIA~~L~-----iS~~TV~~hl~~i~~KLg~~ 219 (235)
T Consensus 147 ~LT~~E~~LL~~L~~~~g~vvsre~l~~~vwg~~~~~~~~~idv~I~rLRkKl~~~ 202 (223)
T PRK11517 147 TLTRKEFQLLWLLASRAGEIIPRTVIASEIWGINFDSDTNTVDVAIRRLRAKVDDP 202 (223)
T ss_pred CCCHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCC
T ss_conf 29999999999998689985989999999629887888587999999999985788