HHsearch alignment for GI: 254780693 and conserved domain: PRK12512

>PRK12512 RNA polymerase sigma factor; Provisional.
Probab=97.91  E-value=3.2e-05  Score=56.36  Aligned_cols=46  Identities=30%  Similarity=0.325  Sum_probs=42.6

Q ss_pred             CCCHHHHHHHHH-HHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHCCC
Q ss_conf             499899999999-9879997899999499988999999999998079
Q gi|254780693|r  173 NLTERETSCLQL-AGDGYTSEEIAEKLGLSVHTVNAYLGSATVKLDA  218 (235)
Q Consensus       173 ~LT~RE~evL~l-~a~G~t~~eIA~~L~iS~~TV~~hl~~i~~KLg~  218 (235)
T Consensus       131 ~Lp~~~R~vi~L~~~~g~s~~EIA~~lgis~~tVk~~l~RA~~~Lr~  177 (184)
T PRK12512        131 TLPPRQRDVVQSIAVEGASIKETAAKLSMSEGAVRVALHRGLAALAA  177 (184)
T ss_pred             CCCHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHH
T ss_conf             89999999999998559799999999891999999999999999999