HHsearch alignment for GI: 254780693 and conserved domain: pfam01978
>pfam01978 TrmB Sugar-specific transcriptional regulator TrmB. One member of this family, TrmB, has been shown to be a sugar-specific transcriptional regulator of the trehalose/maltose ABC transporter in Thermococcus litoralis.
Probab=92.51 E-value=0.46 Score=26.74 Aligned_cols=44 Identities=30% Similarity=0.227 Sum_probs=37.8
Q ss_pred CCCCHHHHHHHHHHH--CCCCHHHHHHHHCCCHHHHHHHHHHHHHH
Q ss_conf 449989999999998--79997899999499988999999999998
Q gi|254780693|r 172 RNLTERETSCLQLAG--DGYTSEEIAEKLGLSVHTVNAYLGSATVK 215 (235)
Q Consensus 172 ~~LT~RE~evL~l~a--~G~t~~eIA~~L~iS~~TV~~hl~~i~~K 215 (235)
T Consensus 4 ~Gls~~E~~vY~~Ll~~g~~t~~eia~~~~i~r~~vY~~L~~L~~k 49 (68)
T pfam01978 4 LGLSEYEAKVYLALLKLGPATADEIAEESGVPRSKVYEVLRSLEKK 49 (68)
T ss_pred CCCCHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHC
T ss_conf 3989999999999998199889999999598898999999999988