HHsearch alignment for GI: 254780693 and conserved domain: pfam03811
>pfam03811 Ins_element1 Insertion element protein.
Probab=92.21 E-value=0.19 Score=29.51 Aligned_cols=36 Identities=19% Similarity=0.242 Sum_probs=32.6
Q ss_pred HHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHH
Q ss_conf 999999999879997899999499988999999999
Q gi|254780693|r 177 RETSCLQLAGDGYTSEEIAEKLGLSVHTVNAYLGSA 212 (235)
Q Consensus 177 RE~evL~l~a~G~t~~eIA~~L~iS~~TV~~hl~~i 212 (235)
T Consensus 52 vkeqiv~m~~nG~GiRdtaRvl~Is~nTVlrtLK~s 87 (88)
T pfam03811 52 TKEQIVDMAMNGAGCRYTARTLKIGINTVIRTLKNS 87 (88)
T ss_pred HHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHCC
T ss_conf 789999997679854044787375689999987535