HHsearch results for GI: 254780693 and protein with PDBid: 1kgs_A
>1kgs_A DRRD, DNA binding response regulator D; DNA-binding protein, ALPH-beta sandwich, winged-helix, helix-turn-helix, DNA binding protein; HET: DNA MSE; 1.50A {Thermotoga maritima} SCOP: a.4.6.1 c.23.1.1
Probab=96.73 E-value=0.0016 Score=42.75 Aligned_cols=50 Identities=22% Similarity=0.216 Sum_probs=43.6
Q ss_pred CCCHHHHHHHHHHHCCC----CHHHHHHHH-----CCCHHHHHHHHHHHHHHCCCCCHH
Q ss_conf 49989999999998799----978999994-----999889999999999980799789
Q gi|254780693|r 173 NLTERETSCLQLAGDGY----TSEEIAEKL-----GLSVHTVNAYLGSATVKLDAVNRI 222 (235)
Q Consensus 173 ~LT~RE~evL~l~a~G~----t~~eIA~~L-----~iS~~TV~~hl~~i~~KLg~~nR~ 222 (235)
.||++|.++|.++++.. |.++|...+ .++.+||+.|+.++++||+.....
T Consensus 151 ~Lt~~E~~lL~~L~~~~~~vvsr~~L~~~vwg~~~~~~~~tl~~~I~rLR~KL~~~~~~ 209 (225)
T 1kgs_A 151 DLTKKEYQILEYLVMNKNRVVTKEELQEHLWSFDDEVFSDVLRSHIKNLRKKVDKGFKK 209 (225)
T ss_dssp CCCHHHHHHHHHHHHTTTSCEEHHHHHHHCC-----CHHHHHHHHHHHHHHHHHTTCSS
T ss_pred ECCHHHHHHHHHHHHCCCEEECHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCC
T ss_conf 26579999999987524344429999998717777876576999999999984577999