HHsearch results for GI: 254780693 and protein with PDBid: 1ub9_A
>1ub9_A Hypothetical protein PH1061; helix-turn-helix motif, winged helix motif, structural genomics, transcription; 2.05A {Pyrococcus horikoshii OT3} SCOP: a.4.5.28
Probab=90.42 E-value=0.33 Score=26.19 Aligned_cols=41 Identities=7% Similarity=0.008 Sum_probs=35.7
Q ss_pred CHHHHHHHHHHH--CCCCHHHHHHHHCCCHHHHHHHHHHHHHH
Q ss_conf 989999999998--79997899999499988999999999998
Q gi|254780693|r 175 TERETSCLQLAG--DGYTSEEIAEKLGLSVHTVNAYLGSATVK 215 (235)
Q Consensus 175 T~RE~evL~l~a--~G~t~~eIA~~L~iS~~TV~~hl~~i~~K 215 (235)
+|-+..||..+. .+.|..|||..++||..||..|++.+-++
T Consensus 15 ~p~r~~IL~~L~~~~~~t~~eLa~~l~is~~~vs~~l~~Le~~ 57 (100)
T 1ub9_A 15 NPVRLGIMIFLLPRRKAPFSQIQKVLDLTPGNLDSHIRVLERN 57 (100)
T ss_dssp SHHHHHHHHHHHHHSEEEHHHHHHHTTCCHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHC
T ss_conf 9999999999851899839999999891998999999999858