HHsearch results for GI: 254780693 and protein with PDBid: 1ub9_A

>1ub9_A Hypothetical protein PH1061; helix-turn-helix motif, winged helix motif, structural genomics, transcription; 2.05A {Pyrococcus horikoshii OT3} SCOP: a.4.5.28
Probab=90.42  E-value=0.33  Score=26.19  Aligned_cols=41  Identities=7%  Similarity=0.008  Sum_probs=35.7

Q ss_pred             CHHHHHHHHHHH--CCCCHHHHHHHHCCCHHHHHHHHHHHHHH
Q ss_conf             989999999998--79997899999499988999999999998
Q gi|254780693|r  175 TERETSCLQLAG--DGYTSEEIAEKLGLSVHTVNAYLGSATVK  215 (235)
Q Consensus       175 T~RE~evL~l~a--~G~t~~eIA~~L~iS~~TV~~hl~~i~~K  215 (235)
                      +|-+..||..+.  .+.|..|||..++||..||..|++.+-++
T Consensus        15 ~p~r~~IL~~L~~~~~~t~~eLa~~l~is~~~vs~~l~~Le~~   57 (100)
T 1ub9_A           15 NPVRLGIMIFLLPRRKAPFSQIQKVLDLTPGNLDSHIRVLERN   57 (100)
T ss_dssp             SHHHHHHHHHHHHHSEEEHHHHHHHTTCCHHHHHHHHHHHHHT
T ss_pred             CHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHC
T ss_conf             9999999999851899839999999891998999999999858