HHsearch results for GI: 254780693 and protein with PDBid: 3clo_A
>3clo_A Transcriptional regulator; NP_811094.1, bacterial regulatory proteins, LUXR family, structural genomics; 2.04A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.70 E-value=5.7e-17 Score=138.59 Aligned_cols=63 Identities=35% Similarity=0.337 Sum_probs=61.5
Q ss_pred CCCCHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCC
Q ss_conf 449989999999998799978999994999889999999999980799789999999976999
Q gi|254780693|r 172 RNLTERETSCLQLAGDGYTSEEIAEKLGLSVHTVNAYLGSATVKLDAVNRIQAIAKAIRFGYI 234 (235)
Q Consensus 172 ~~LT~RE~evL~l~a~G~t~~eIA~~L~iS~~TV~~hl~~i~~KLg~~nR~qava~A~~~Gli 234 (235)
..||+||.|||.|+++|+|++|||.+|+||++||++|++++++||||.||+|||++|.+.|||
T Consensus 196 ~~Ls~re~~il~~~~~G~~~~eia~~l~is~~tv~~h~~~~~~kl~~~~~~~~~~~a~~~~li 258 (258)
T 3clo_A 196 NILSEREKEILRCIRKGLSSKEIAATLYISVNTVNRHRQNILEKLSVGNSIEACRAAELMKLL 258 (258)
T ss_dssp TSSCHHHHHHHHHHHTTCCHHHHHHHHTCCHHHHHHHHHHHHHHTTCSSHHHHHHHHHHTTCC
T ss_pred CCCCHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCC
T ss_conf 999989999999998599999999894999999999999999985899999999999985999