HHsearch results for GI: 254780693 and protein with PDBid: 3hug_A
>3hug_A RNA polymerase sigma factor; ECF sigma factor, zinc binding anti-sigma factor, oxidative stress, transcription regulation; 2.35A {Mycobacterium tuberculosis}
Probab=97.93 E-value=0.0001 Score=51.20 Aligned_cols=44 Identities=27% Similarity=0.396 Sum_probs=42.2
Q ss_pred CCCHHHHHHHHHH-HCCCCHHHHHHHHCCCHHHHHHHHHHHHHHC
Q ss_conf 4998999999999-8799978999994999889999999999980
Q gi|254780693|r 173 NLTERETSCLQLA-GDGYTSEEIAEKLGLSVHTVNAYLGSATVKL 216 (235)
Q Consensus 173 ~LT~RE~evL~l~-a~G~t~~eIA~~L~iS~~TV~~hl~~i~~KL 216 (235)
.|++++++|+.+. -+|+|.+|||.+||||++||+.++.++.+||
T Consensus 37 ~L~~~~r~vi~l~~~~g~s~~eIA~~lgis~~tV~~~l~Ra~~~L 81 (92)
T 3hug_A 37 QLSAEHRAVIQRSYYRGWSTAQIATDLGIAEGTVKSRLHYAVRAL 81 (92)
T ss_dssp TSCHHHHHHHHHHHTSCCCHHHHHHHHTSCHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHH
T ss_conf 799999999999999399999999998969999999999999999