HHsearch results for GI: 254780693 and protein with PDBid: 3hug_A

>3hug_A RNA polymerase sigma factor; ECF sigma factor, zinc binding anti-sigma factor, oxidative stress, transcription regulation; 2.35A {Mycobacterium tuberculosis}
Probab=97.93  E-value=0.0001  Score=51.20  Aligned_cols=44  Identities=27%  Similarity=0.396  Sum_probs=42.2

Q ss_pred             CCCHHHHHHHHHH-HCCCCHHHHHHHHCCCHHHHHHHHHHHHHHC
Q ss_conf             4998999999999-8799978999994999889999999999980
Q gi|254780693|r  173 NLTERETSCLQLA-GDGYTSEEIAEKLGLSVHTVNAYLGSATVKL  216 (235)
Q Consensus       173 ~LT~RE~evL~l~-a~G~t~~eIA~~L~iS~~TV~~hl~~i~~KL  216 (235)
                      .|++++++|+.+. -+|+|.+|||.+||||++||+.++.++.+||
T Consensus        37 ~L~~~~r~vi~l~~~~g~s~~eIA~~lgis~~tV~~~l~Ra~~~L   81 (92)
T 3hug_A           37 QLSAEHRAVIQRSYYRGWSTAQIATDLGIAEGTVKSRLHYAVRAL   81 (92)
T ss_dssp             TSCHHHHHHHHHHHTSCCCHHHHHHHHTSCHHHHHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHH
T ss_conf             799999999999999399999999998969999999999999999