BLAST/PSIBLAST alignment of GI: 254780693 and GI: 82940563 at iteration 1
>gi|82940563|emb|CAJ44292.1| putative transcription regulator protein MotS, LuxR family [Rhizobium leguminosarum bv. viciae] Length = 248
 Score =  218 bits (554), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 107/225 (47%), Positives = 150/225 (66%), Gaps = 3/225 (1%)

Query: 12  SSLQELSPRLHLIQNRIKARNFALYTINSALDFPRRQQLICELHNYDLDSGDIPNILIET 71
           SS  +L PRL  +Q  + A+ FA++ ++ +   P +Q+L+CEL N+   +        + 
Sbjct: 24  SSRSDLFPRLIAMQKLVDAQGFAIFRVSGS-GLPAKQRLVCELENWGPSNAGFGKAFTDA 82

Query: 72  YGDDFLFHFNSGLLPIIWQSIQEETVIESS--GQLSVRLEGGLLPFAGIAFPVRLGFHKN 129
           YGD  L H +  LLP+ W    +      +       RL+ G+LPF+G+AFPVRLG   N
Sbjct: 83  YGDILLDHIDKSLLPLSWAGGYDRAAPGPADFAPFMTRLQDGILPFSGLAFPVRLGAVGN 142

Query: 130 GYVIFTSEFLMLANEVIIEAHGACYQVITDFLELFKKRSSAARNLTERETSCLQLAGDGY 189
           G+++FT + +  +++ I+E HG C  ++ D L L ++R++AA  L+ERE +CLQLAGDG 
Sbjct: 143 GFILFTGDEIDPSSDTIVELHGRCCHIMMDLLSLDERRTAAAEALSEREIACLQLAGDGR 202

Query: 190 TSEEIAEKLGLSVHTVNAYLGSATVKLDAVNRIQAIAKAIRFGYI 234
            SEEIA+KLGLSVHTVNAYLGSAT+KLD+VNRIQAIAKAIR GYI
Sbjct: 203 ISEEIADKLGLSVHTVNAYLGSATIKLDSVNRIQAIAKAIRLGYI 247