RPSBLAST alignment of GI: 254780693 and protein with PDBid: 1l3l

>1l3l_A Transcriptional activator protein TRAR; helix-turn-helix DNA binding motif, alpha/beta/alpha sandwich; HET: LAE; 1.66A {Agrobacterium tumefaciens} SCOP: a.4.6.2 d.110.5.1 PDB: 1h0m_A* Length = 234

 Score = 79.5 bits (195), Expect = 6e-16
 Identities = 31/165 (18%), Positives = 56/165 (33%), Gaps = 4/165 (2%)

Query: 74  DDFLFHFNSGLLPIIWQSIQEETVIESSGQLSVRLEGGLLPFAGIAFPVRLGFHKNGYVI 133
           D  +    S      W    E   +    +            +GI  P++          
Sbjct: 70  DPVVKRARSRKHIFTWSGEHERPTLSKDERAFYDHASDFGIRSGITIPIKTANGFMSMFT 129

Query: 134 FTSEFLMLANEVIIEAHGACYQVITDFLELFKKRSSAARN----LTERETSCLQLAGDGY 189
             S+  ++  +  I+A  A   +      +   R++        L  +E + L+    G 
Sbjct: 130 MASDKPVIDLDREIDAVAAAATIGQIHARISFLRTTPTAEDAAWLDPKEATYLRWIAVGK 189

Query: 190 TSEEIAEKLGLSVHTVNAYLGSATVKLDAVNRIQAIAKAIRFGYI 234
           T EEIA+  G+  ++V   L  A  + D  ++    A AIR   I
Sbjct: 190 TMEEIADVEGVKYNSVRVKLREAMKRFDVRSKAHLTALAIRRKLI 234