RPSBLAST alignment of GI: 254780693 and protein with PDBid: 3clo
>3clo_A Transcriptional regulator; NP_811094.1, bacterial regulatory proteins, LUXR family, structural genomics; 2.04A {Bacteroides thetaiotaomicron vpi-5482} Length = 258
Score = 73.5 bits (180), Expect = 4e-14
Identities = 35/196 (17%), Positives = 69/196 (35%), Gaps = 16/196 (8%)
Query: 53 ELHNYDLDSGDIPNILIETYGDDFLF-HFNSGLLPII----------WQSIQEETVIESS 101
+ + +I++ +D ++ + L S+ ++
Sbjct: 65 NFLGLTPE--EAALSVIDSMDEDCIYRRIHPEDLVEKRLMEYKFFQKTFSMSPGERLKYR 122
Query: 102 GQLSVRL---EGGLLPFAGIAFPVRLGFHKNGYVIFTSEFLMLANEVIIEAHGACYQVIT 158
G+ +R+ +G + ++ N ++IF L + Q+
Sbjct: 123 GRCRLRMMNEKGVYQYIDNLVQIMQNTPAGNVWLIFCLYSLSADQRPEQGIYATITQMER 182
Query: 159 DFLELFKKRSSAARNLTERETSCLQLAGDGYTSEEIAEKLGLSVHTVNAYLGSATVKLDA 218
+E L+ERE L+ G +S+EIA L +SV+TVN + + KL
Sbjct: 183 GEVETLSLSEEHRNILSEREKEILRCIRKGLSSKEIAATLYISVNTVNRHRQNILEKLSV 242
Query: 219 VNRIQAIAKAIRFGYI 234
N I+A A +
Sbjct: 243 GNSIEACRAAELMKLL 258