HHsearch alignment for GI: 254780694 and conserved domain: COG0745
>COG0745 OmpR Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription].
Probab=97.07 E-value=0.00078 Score=43.48 Aligned_cols=186 Identities=13% Similarity=0.094 Sum_probs=98.7
Q ss_pred CCCHHHHHHHHHHHHHHHCCCEEEEECCC----CCCCCCCCEEECCC-----CCHHHHHHHHHCCCCCCCHHHHHHHHHH
Q ss_conf 27999999999999987193023000266----63111232100068-----9589999999669845173899998523
Q gi|254780694|r 39 LDCTVSWTMRMYALTEYVGASHFLLVRWD----LFQEQKLDSIVSSD-----WPFDLVRCMALSEKDKYYNVLQRPTELF 109 (246)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~----~~~~~~~~~~l~~~-----~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 109 (246)
T Consensus 6 veDd~~i~~~l~~~L~~~G~~v~~~~~~~~a~~~~~~~-~dlviLD~~lP~~dG~~~~~~iR~~-~~~~~PIi------~ 77 (229)
T COG0745 6 VEDDPELAELLKEYLEEEGYEVDVAADGEEALEAAREQ-PDLVLLDLMLPDLDGLELCRRLRAK-KGSGPPII------V 77 (229)
T ss_pred EECCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHCC-CCEEEEECCCCCCCHHHHHHHHHHC-CCCCCCEE------E
T ss_conf 91888999999999987597899978989999997269-9999998899985689999999851-68999889------9
Q ss_pred HHHHCCCHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHH
Q ss_conf 24430325433332144571475033736899999997178754698999999999999997542014677988888977
Q gi|254780694|r 110 CPVFHTLPENITPPAGMDNRYCSLTFDVARIRIGLMLLFPKGRIILRDRLWEIGLLAAYQANMFKSYDVHWGKDFELTGR 189 (246)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LT~R 189 (246)
T Consensus 78 Lta~~~~~d~v~gl~~GADDYl~KPf~~~EL~ARi~a~lRR~~~~~~~~~~~~~~~g~l~~d~~~~~v~~~~~~l~Lt~~ 157 (229)
T COG0745 78 LTARDDEEDRVLGLEAGADDYLTKPFSPRELLARLRALLRRNAGASRAEASEVLVFGDLTLDPDTRTVTLNGRELTLTPK 157 (229)
T ss_pred EECCCCHHHHHHHHHCCCHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCEEEECCCCEEEECCEEECCCHH
T ss_conf 96687288899999756342334889989999999999673656655454650798899998021989989987317889
Q ss_pred HHHHHHHHHCC----CCHHHHHHHH-----CCCHHHHHHHHHHHHHHHCCCC
Q ss_conf 99999999859----9979999994-----9998899999999999807998
Q gi|254780694|r 190 EVECLTWISEG----KTSDEIAVIL-----GISRNTVNNYIASIMRKTATKT 232 (246)
Q Consensus 190 E~eVl~lia~G----~t~~eIA~~L-----~iS~~TV~~hl~~i~~KLgv~~ 232 (246)
T Consensus 158 Ef~lL~~L~~~~g~v~sR~~L~~~vw~~~~~~~~rtvdvhI~rLR~Kl~~~~ 209 (229)
T COG0745 158 EFELLELLARHPGRVLSREQLLEAVWGYDFEVDSRTVDVHISRLRKKLEKDP 209 (229)
T ss_pred HHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCEEHHHHHHHHHHHCCCC
T ss_conf 9999999996699526899999986086668764330599889999733567