HHsearch alignment for GI: 254780694 and conserved domain: COG0745

>COG0745 OmpR Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription].
Probab=97.07  E-value=0.00078  Score=43.48  Aligned_cols=186  Identities=13%  Similarity=0.094  Sum_probs=98.7

Q ss_pred             CCCHHHHHHHHHHHHHHHCCCEEEEECCC----CCCCCCCCEEECCC-----CCHHHHHHHHHCCCCCCCHHHHHHHHHH
Q ss_conf             27999999999999987193023000266----63111232100068-----9589999999669845173899998523
Q gi|254780694|r   39 LDCTVSWTMRMYALTEYVGASHFLLVRWD----LFQEQKLDSIVSSD-----WPFDLVRCMALSEKDKYYNVLQRPTELF  109 (246)
Q Consensus        39 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~----~~~~~~~~~~l~~~-----~~~~~~~~~~~~~~~~~~p~~~~~~~~~  109 (246)
T Consensus         6 veDd~~i~~~l~~~L~~~G~~v~~~~~~~~a~~~~~~~-~dlviLD~~lP~~dG~~~~~~iR~~-~~~~~PIi------~   77 (229)
T COG0745           6 VEDDPELAELLKEYLEEEGYEVDVAADGEEALEAAREQ-PDLVLLDLMLPDLDGLELCRRLRAK-KGSGPPII------V   77 (229)
T ss_pred             EECCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHCC-CCEEEEECCCCCCCHHHHHHHHHHC-CCCCCCEE------E
T ss_conf             91888999999999987597899978989999997269-9999998899985689999999851-68999889------9


Q ss_pred             HHHHCCCHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHH
Q ss_conf             24430325433332144571475033736899999997178754698999999999999997542014677988888977
Q gi|254780694|r  110 CPVFHTLPENITPPAGMDNRYCSLTFDVARIRIGLMLLFPKGRIILRDRLWEIGLLAAYQANMFKSYDVHWGKDFELTGR  189 (246)
Q Consensus       110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LT~R  189 (246)
T Consensus        78 Lta~~~~~d~v~gl~~GADDYl~KPf~~~EL~ARi~a~lRR~~~~~~~~~~~~~~~g~l~~d~~~~~v~~~~~~l~Lt~~  157 (229)
T COG0745          78 LTARDDEEDRVLGLEAGADDYLTKPFSPRELLARLRALLRRNAGASRAEASEVLVFGDLTLDPDTRTVTLNGRELTLTPK  157 (229)
T ss_pred             EECCCCHHHHHHHHHCCCHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCEEEECCCCEEEECCEEECCCHH
T ss_conf             96687288899999756342334889989999999999673656655454650798899998021989989987317889


Q ss_pred             HHHHHHHHHCC----CCHHHHHHHH-----CCCHHHHHHHHHHHHHHHCCCC
Q ss_conf             99999999859----9979999994-----9998899999999999807998
Q gi|254780694|r  190 EVECLTWISEG----KTSDEIAVIL-----GISRNTVNNYIASIMRKTATKT  232 (246)
Q Consensus       190 E~eVl~lia~G----~t~~eIA~~L-----~iS~~TV~~hl~~i~~KLgv~~  232 (246)
T Consensus       158 Ef~lL~~L~~~~g~v~sR~~L~~~vw~~~~~~~~rtvdvhI~rLR~Kl~~~~  209 (229)
T COG0745         158 EFELLELLARHPGRVLSREQLLEAVWGYDFEVDSRTVDVHISRLRKKLEKDP  209 (229)
T ss_pred             HHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCEEHHHHHHHHHHHCCCC
T ss_conf             9999999996699526899999986086668764330599889999733567