HHsearch alignment for GI: 254780694 and conserved domain: COG1356
>COG1356 tfx Transcriptional regulator [DNA replication, recombination and repair].
Probab=92.19 E-value=0.09 Score=30.24 Aligned_cols=46 Identities=26% Similarity=0.294 Sum_probs=39.1
Q ss_pred CCCCHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHC
Q ss_conf 8889779999999985999799999949998899999999999807
Q gi|254780694|r 184 FELTGREVECLTWISEGKTSDEIAVILGISRNTVNNYIASIMRKTA 229 (246)
Q Consensus 184 ~~LT~RE~eVl~lia~G~t~~eIA~~L~iS~~TV~~hl~~i~~KLg 229 (246)
T Consensus 7 tflte~qikvl~lRekG~tQ~eIA~~L~TTraNvSaIEkrA~enIe 52 (143)
T COG1356 7 TFLTEQQIKVLVLREKGLTQSEIARILKTTRANVSAIEKRALENIE 52 (143)
T ss_pred CEEEHHHEEEEEHHHCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHH
T ss_conf 1100230235652640564899999975451017999999999899