HHsearch alignment for GI: 254780694 and conserved domain: COG2771
>COG2771 CsgD DNA-binding HTH domain-containing proteins [Transcription].
Probab=99.53 E-value=3.9e-14 Score=109.58 Aligned_cols=63 Identities=41% Similarity=0.572 Sum_probs=60.8
Q ss_pred CCCCHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCC
Q ss_conf 888977999999998599979999994999889999999999980799889999999975898
Q gi|254780694|r 184 FELTGREVECLTWISEGKTSDEIAVILGISRNTVNNYIASIMRKTATKTRSGAIAYAVRNNIV 246 (246)
Q Consensus 184 ~~LT~RE~eVl~lia~G~t~~eIA~~L~iS~~TV~~hl~~i~~KLgv~~R~eav~~A~~~Gli 246 (246)
T Consensus 3 ~~Lt~rE~~~~~l~~~G~s~~eia~~l~is~~tV~~h~~~i~~Kl~~~~r~~~~~~~~~~~~~ 65 (65)
T COG2771 3 ADLTPREREILRLVAQGKSNKEIARILGISEETVKTHLRNIYRKLGVKNRVELVALALRLGLI 65 (65)
T ss_pred CCCCHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCC
T ss_conf 113888999999998699899999998779999999999999997758699999999985449