HHsearch alignment for GI: 254780694 and conserved domain: PRK05572

>PRK05572 sporulation sigma factor SigF; Validated.
Probab=97.14  E-value=0.0013  Score=42.00  Aligned_cols=46  Identities=30%  Similarity=0.302  Sum_probs=42.3

Q ss_pred             CCCCHHHHHHHHHH-HCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHC
Q ss_conf             88897799999999-85999799999949998899999999999807
Q gi|254780694|r  184 FELTGREVECLTWI-SEGKTSDEIAVILGISRNTVNNYIASIMRKTA  229 (246)
Q Consensus       184 ~~LT~RE~eVl~li-a~G~t~~eIA~~L~iS~~TV~~hl~~i~~KLg  229 (246)
T Consensus       200 ~~L~~rEr~Vi~~ry~~~~tl~EIa~~lgiS~eRVrQI~~~Al~kLR  246 (251)
T PRK05572        200 RELDERERLIIYLRYFKDKTQSEVAKRLGISQVQVSRLEKKILKQMK  246 (251)
T ss_pred             HCCCHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHH
T ss_conf             72899999999998178988999999979799999999999999999