HHsearch alignment for GI: 254780694 and conserved domain: PRK06596

>PRK06596 RNA polymerase factor sigma-32; Reviewed.

Probab=96.71  E-value=0.005  Score=38.33  Aligned_cols=46  Identities=20%  Similarity=0.226  Sum_probs=41.0

Q ss_pred             CCCCHHHHHHHHHH---HCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHC
Q ss_conf             88897799999999---85999799999949998899999999999807
Q gi|254780694|r  184 FELTGREVECLTWI---SEGKTSDEIAVILGISRNTVNNYIASIMRKTA  229 (246)
Q Consensus       184 ~~LT~RE~eVl~li---a~G~t~~eIA~~L~iS~~TV~~hl~~i~~KLg  229 (246)
T Consensus       229 ~~L~~REr~Il~~Ry~~d~~~TL~EIg~~lgiSrERVRQIe~kAL~KLR  277 (284)
T PRK06596        229 ETLDERSRDIIEARWLDDDKSTLQELAAEYGVSAERIRQIEKNAMKKLK  277 (284)
T ss_pred             HHCCHHHHHHHHHHCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHH
T ss_conf             6099999999999767999948999999979799999999999999999