HHsearch alignment for GI: 254780694 and conserved domain: PRK06759

>PRK06759 RNA polymerase factor sigma-70; Validated.
Probab=97.93  E-value=2.9e-05  Score=52.63  Aligned_cols=45  Identities=22%  Similarity=0.097  Sum_probs=42.7

Q ss_pred             CCCHHHHHHHHHH-HCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHC
Q ss_conf             8897799999999-85999799999949998899999999999807
Q gi|254780694|r  185 ELTGREVECLTWI-SEGKTSDEIAVILGISRNTVNNYIASIMRKTA  229 (246)
Q Consensus       185 ~LT~RE~eVl~li-a~G~t~~eIA~~L~iS~~TV~~hl~~i~~KLg  229 (246)
T Consensus       106 ~L~~re~~ii~~~~~~g~t~~EIA~~~gis~~~Vk~~~r~Al~KLR  151 (154)
T PRK06759        106 VLDEKEKYIIFERFFVGKTMGEIALETEMTYYQVRWIYRQALEKMR  151 (154)
T ss_pred             HCCHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHH
T ss_conf             4999999999999996998999999989899999999999999987