HHsearch alignment for GI: 254780694 and conserved domain: PRK07037
>PRK07037 extracytoplasmic-function sigma-70 factor; Validated.
Probab=98.31 E-value=1.7e-06 Score=60.63 Aligned_cols=45 Identities=29% Similarity=0.354 Sum_probs=41.3
Q ss_pred CCCCHHHHHHHHHH-HCCCCHHHHHHHHCCCHHHHHHHHHHHHHHH
Q ss_conf 88897799999999-8599979999994999889999999999980
Q gi|254780694|r 184 FELTGREVECLTWI-SEGKTSDEIAVILGISRNTVNNYIASIMRKT 228 (246)
Q Consensus 184 ~~LT~RE~eVl~li-a~G~t~~eIA~~L~iS~~TV~~hl~~i~~KL 228 (246)
T Consensus 122 ~~LP~~~R~v~~L~~~eg~s~~EIAe~LgiS~~tVk~~l~rAl~~L 167 (183)
T PRK07037 122 DELPARTRAAFEMVRLRGETLQDIARELNVSQTLVNFMIRDALRHC 167 (183)
T ss_pred HCCCHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHH
T ss_conf 8199999999898987398999999998929999999999999999