HHsearch alignment for GI: 254780694 and conserved domain: PRK07500
>PRK07500 rpoH2 RNA polymerase factor sigma-32; Reviewed.
Probab=96.87 E-value=0.0025 Score=40.20 Aligned_cols=47 Identities=26% Similarity=0.284 Sum_probs=41.3
Q ss_pred CCCCHHHHHHHHH---HHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCC
Q ss_conf 8889779999999---9859997999999499988999999999998079
Q gi|254780694|r 184 FELTGREVECLTW---ISEGKTSDEIAVILGISRNTVNNYIASIMRKTAT 230 (246)
Q Consensus 184 ~~LT~RE~eVl~l---ia~G~t~~eIA~~L~iS~~TV~~hl~~i~~KLgv 230 (246)
T Consensus 226 ~~L~eREr~Ii~~r~~~~e~~TL~EIg~~lgvSreRVRQIe~kAL~KLR~ 275 (289)
T PRK07500 226 QTLNERELFIIRERRLREDGATLEALGEELGISKERVRQIEARALEKLRR 275 (289)
T ss_pred HCCCHHHHHHHHHHCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHH
T ss_conf 54999999999997668998589999999797999999999999999999