HHsearch alignment for GI: 254780694 and conserved domain: PRK09047

>PRK09047 RNA polymerase factor sigma-70; Validated.

Probab=98.18  E-value=4.3e-06  Score=57.97  Aligned_cols=46  Identities=22%  Similarity=0.199  Sum_probs=42.4

Q ss_pred             CCCCHHHHHHHHHH-HCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHC
Q ss_conf             88897799999999-85999799999949998899999999999807
Q gi|254780694|r  184 FELTGREVECLTWI-SEGKTSDEIAVILGISRNTVNNYIASIMRKTA  229 (246)
Q Consensus       184 ~~LT~RE~eVl~li-a~G~t~~eIA~~L~iS~~TV~~hl~~i~~KLg  229 (246)
T Consensus       105 ~~Lp~~qR~vl~L~~~egls~~EIA~~l~is~~tVk~~l~RAr~~Lr  151 (161)
T PRK09047        105 QKLPARQREAFLLRYWEDMDVAETAAAMGCSEGSVKTHCSRATHTLA  151 (161)
T ss_pred             HHCCHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHH
T ss_conf             81999999998999998779999999989699999999999999999