HHsearch alignment for GI: 254780694 and conserved domain: PRK09390

>PRK09390 fixJ response regulator FixJ; Provisional.
Probab=99.89  E-value=1.2e-22  Score=164.28  Aligned_cols=201  Identities=15%  Similarity=0.106  Sum_probs=128.0

Q ss_pred             HHEEEEECCCCHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCEEECCCCCHH
Q ss_conf             11000221445888876553023213799997327999999999999987193023000266631112321000689589
Q gi|254780694|r    6 QQVNIVLNREDEQRTSFVSHLPTRSDLLARMIPLDCTVSWTMRMYALTEYVGASHFLLVRWDLFQEQKLDSIVSSDWPFD   85 (246)
Q Consensus         6 ~~~~~~l~r~d~~r~~~v~~l~~~~d~~~~l~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~   85 (246)
T Consensus         2 ~k~tIliVDDh~~vr~gl~~lL~~~~~~--v~~~~~~~~~l~~~----~-----------~~~pdlvllDi~mP~~~G~e   64 (202)
T PRK09390          2 TKGVVHVVDDDEAMRDSLAFLLDSAGFE--VRLFESAQAFLDAL----P-----------GLRFGCVVTDVRMPGIDGIE   64 (202)
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHHCCCE--EEEECCHHHHHHHH----H-----------CCCCCEEEECCCCCCCCCHH
T ss_conf             9997999849999999999999988998--99989999999997----6-----------57979998779999989607


Q ss_pred             HHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
Q ss_conf             99999966984517389999852324430325433332144571475033736899999997178754698999999999
Q gi|254780694|r   86 LVRCMALSEKDKYYNVLQRPTELFCPVFHTLPENITPPAGMDNRYCSLTFDVARIRIGLMLLFPKGRIILRDRLWEIGLL  165 (246)
Q Consensus        86 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  165 (246)
T Consensus        65 ~l~~l~~~~p~--~~v------ivlT~~~~~~~~~~al~~GA~gyl~K~~~~~~L~~aI~~~l~~~~~~~~~~~~-----  131 (202)
T PRK09390         65 LLRRLKARGSP--LPV------IVMTGHGDVPLAVEAMKLGAIDFIEKPFEDERLIGAIERALAQAPAAAKSEAV-----  131 (202)
T ss_pred             HHHHHHHCCCC--CCE------EEEEECCCHHHHHHHHHCCCHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCHHH-----
T ss_conf             99998722899--867------99974574888899998294644559999999999999999715232421466-----


Q ss_pred             HHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCC
Q ss_conf             99999754201467798888897799999999859997999999499988999999999998079988999999997589
Q gi|254780694|r  166 AAYQANMFKSYDVHWGKDFELTGREVECLTWISEGKTSDEIAVILGISRNTVNNYIASIMRKTATKTRSGAIAYAVRNNI  245 (246)
Q Consensus       166 ~~~~~~~~~~~~~~~~~~~~LT~RE~eVl~lia~G~t~~eIA~~L~iS~~TV~~hl~~i~~KLgv~~R~eav~~A~~~Gl  245 (246)
T Consensus       132 ~----------~~~~~~~~~LT~RE~eVL~ll~~G~snkeIA~~L~iS~~TV~~h~~~I~~KL~v~~~~elv~~A~~~Gl  201 (202)
T PRK09390        132 A----------ADIRARIASLSERERQVMDGLVAGLSNKVIARDLDISPRTVEVYRANVMTKMQAGSLSELVRMALRAGA  201 (202)
T ss_pred             H----------HHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCC
T ss_conf             7----------888740066998999999999838968999999798788999999999999688988999999998599


Q ss_pred             C
Q ss_conf             8
Q gi|254780694|r  246 V  246 (246)
Q Consensus       246 i  246 (246)
T Consensus       202 l  202 (202)
T PRK09390        202 L  202 (202)
T ss_pred             C
T ss_conf             9