HHsearch alignment for GI: 254780694 and conserved domain: PRK09468
>PRK09468 ompR osmolarity response regulator; Provisional.
Probab=96.92 E-value=0.00054 Score=44.51 Aligned_cols=201 Identities=9% Similarity=0.074 Sum_probs=98.2
Q ss_pred HHEEEEECCCCHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCEEECCCCCHH
Q ss_conf 11000221445888876553023213799997327999999999999987193023000266631112321000689589
Q gi|254780694|r 6 QQVNIVLNREDEQRTSFVSHLPTRSDLLARMIPLDCTVSWTMRMYALTEYVGASHFLLVRWDLFQEQKLDSIVSSDWPFD 85 (246)
Q Consensus 6 ~~~~~~l~r~d~~r~~~v~~l~~~~d~~~~l~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 85 (246)
T Consensus 4 ~~~kILiVEDd~~~~~~l~~~L~~~g~--~v~~a~~~~~a~~~~----~~~-----------~~DlvilDi~lp~~dG~~ 66 (239)
T PRK09468 4 ENYKILVVDDDMRLRALLERYLTEQGF--QVRSAANAEQMDRLL----TRE-----------SFHLMVLDLMLPGEDGLS 66 (239)
T ss_pred CCCEEEEEECCHHHHHHHHHHHHHCCC--EEEEECCHHHHHHHH----HHC-----------CCCEEEECCCCCCCCCCH
T ss_conf 897899990999999999999998899--999989999999999----758-----------998999878998888734
Q ss_pred HHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHCCCCCC--CH-HHHHHH
Q ss_conf 999999669845173899998523244303254333321445714750337368999999971787546--98-999999
Q gi|254780694|r 86 LVRCMALSEKDKYYNVLQRPTELFCPVFHTLPENITPPAGMDNRYCSLTFDVARIRIGLMLLFPKGRII--LR-DRLWEI 162 (246)
Q Consensus 86 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-~~~~~~ 162 (246)
T Consensus 67 l~~~iR~~~~--~~pII------~LTa~~~~~d~i~~l~~GADDYi~KPf~~~EL~aRI~allrR~~~~~~~~~~~~~~~ 138 (239)
T PRK09468 67 ICRRLRSQNN--PTPII------MLTAKGEEVDRIVGLEMGADDYLPKPFNPRELLARIRAVLRRQAPELPGAPSQEEEV 138 (239)
T ss_pred HHHHHHHHCC--CCCEE------EEECCCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCE
T ss_conf 6777875057--87789------994667878999999769868855899989999999999863234456776677876
Q ss_pred HHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCC----CCHHHHHHHH-----CCCHHHHHHHHHHHHHHHCCC
Q ss_conf 99999999754201467798888897799999999859----9979999994-----999889999999999980799
Q gi|254780694|r 163 GLLAAYQANMFKSYDVHWGKDFELTGREVECLTWISEG----KTSDEIAVIL-----GISRNTVNNYIASIMRKTATK 231 (246)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~LT~RE~eVl~lia~G----~t~~eIA~~L-----~iS~~TV~~hl~~i~~KLgv~ 231 (246)
T Consensus 139 ~~~g~l~ld~~~~~v~~~~~~i~LT~~E~~LL~~L~~~~g~vvsre~Ll~~vwg~~~~~~~rtidv~I~rLRkKl~~~ 216 (239)
T PRK09468 139 IAFGEFSLNLGTRELFRGDEPIPLTTGEFAVLKALVRHPREPLSRDKLMNLARGREYSAMERSIDVQISRLRRLIEPD 216 (239)
T ss_pred EEECCEEEECCCCEEEECCEEEECCHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCC
T ss_conf 999999999777999989998876789999999999779966769999999629887888483999999999975207