HHsearch alignment for GI: 254780694 and conserved domain: PRK09639
>PRK09639 RNA polymerase sigma factor SigX; Provisional.
Probab=98.15 E-value=5.9e-06 Score=57.08 Aligned_cols=46 Identities=26% Similarity=0.299 Sum_probs=42.3
Q ss_pred CCCCHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHC
Q ss_conf 8889779999999985999799999949998899999999999807
Q gi|254780694|r 184 FELTGREVECLTWISEGKTSDEIAVILGISRNTVNNYIASIMRKTA 229 (246)
Q Consensus 184 ~~LT~RE~eVl~lia~G~t~~eIA~~L~iS~~TV~~hl~~i~~KLg 229 (246)
T Consensus 111 ~~Lp~~~r~v~~l~~~g~s~~EIA~~l~is~~tVk~~l~RA~~~Lr 156 (166)
T PRK09639 111 AKMTERDRTVLLLRFSGYSYKEIAQALGIDESSVGTTLHRAKKKFR 156 (166)
T ss_pred HHCCHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHH
T ss_conf 8399999999999993899999999989199999999999999999