HHsearch alignment for GI: 254780694 and conserved domain: PRK09639

>PRK09639 RNA polymerase sigma factor SigX; Provisional.
Probab=98.15  E-value=5.9e-06  Score=57.08  Aligned_cols=46  Identities=26%  Similarity=0.299  Sum_probs=42.3

Q ss_pred             CCCCHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHC
Q ss_conf             8889779999999985999799999949998899999999999807
Q gi|254780694|r  184 FELTGREVECLTWISEGKTSDEIAVILGISRNTVNNYIASIMRKTA  229 (246)
Q Consensus       184 ~~LT~RE~eVl~lia~G~t~~eIA~~L~iS~~TV~~hl~~i~~KLg  229 (246)
T Consensus       111 ~~Lp~~~r~v~~l~~~g~s~~EIA~~l~is~~tVk~~l~RA~~~Lr  156 (166)
T PRK09639        111 AKMTERDRTVLLLRFSGYSYKEIAQALGIDESSVGTTLHRAKKKFR  156 (166)
T ss_pred             HHCCHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHH
T ss_conf             8399999999999993899999999989199999999999999999